CDS

Accession Number TCMCG049C29038
gbkey CDS
Protein Id XP_034915772.1
Location join(616850..617320,617888..618094,618184..618283,619058..619140,619253..619309,619380..619532,619642..619720,619829..619977,620064..620198,620301..620414,620788..620898,621143..621251,621557..621630)
Gene LOC118049770
GeneID 118049770
Organism Populus alba

Protein

Length 613aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA638679
db_source XM_035059881.1
Definition prolycopene isomerase, chloroplastic isoform X1 [Populus alba]

EGGNOG-MAPPER Annotation

COG_category H
Description Prolycopene isomerase
KEGG_TC -
KEGG_Module M00097        [VIEW IN KEGG]
KEGG_Reaction R07512        [VIEW IN KEGG]
KEGG_rclass RC01960        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
KEGG_ko ko:K09835        [VIEW IN KEGG]
EC 5.2.1.13        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00906        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
ko01110        [VIEW IN KEGG]
map00906        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
map01110        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009657        [VIEW IN EMBL-EBI]
GO:0009662        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016491        [VIEW IN EMBL-EBI]
GO:0016853        [VIEW IN EMBL-EBI]
GO:0016859        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046608        [VIEW IN EMBL-EBI]
GO:0055114        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGAGTTTAGGGTTCAAGAATTCCCTATTTTTTGGCCAGTTCAATACTGTCCAGTTAGGGAGTTCCAAATCCAGAAGCCAAAAACATAGGATTCTGTCTATAGAACCTGTCCGAACCTCAGTTCTCGATGGTTATATTGTACCCAGAAACATAAAAGGCAAAATTGACAATCTTGGTAAAGTAAAGTTGAATAAGGACTTTGTTTTGAGGTCAAAGTCAGTGTTGACTGTGGATAAAGAGGTGGATGTTGATGGAAATGGAGAGTTGGGTAGAGAGAGGAGCAATTACGATGCAATTGTTATTGGGTCTGGTATCGGTGGGTTGGTTGCTGCTACACAGTTGGCAGTGAAGGGAGCTAAAGTTTTGGTCTTGGAGAAGTATGTGATTCCTGGTGGGAGTTCTGGGTATTATGAGAGGGATGGATATACTTTTGATGTTGGCTCTTCTGTTATGTTTGGTTTCAGTGATAAGGGCAACCTAAATTTGATAACAAGGGCATTGGCAGCAGTTGGCTGTGAAATGGAGGTGATTCCTGACCCAACTACTGTCCATTTTCATCTACCCAATGACCTTTCTGTTCAAGTTCACAGAGAGTACATCGACTTCATCTCAGAACTTGCTGCTAAATTTCCCCATGAAAAGGATGGGATCCTTAAATTCTACGGTGAATGCTGGAAGATATTCAATGCCTTGAACTCTCTGGAACTGAAGTCACTTGAGGAGCCAATCTACCTGTTTGGACAATTTTTTCAGAAACCTCTTGAATGCTTGACACTGGCTTATTACCTTCCTCAAAATGCTGGAGATATTGCTCGGAAGTACATGAAGGATCCTCAGTTATTGTCTTTCATTGATGCAGAGTGTTTCATAGTGAGCACAGTCAATGCTTTGCAGACTCCAATGATCAATGCGGCCATGGTCCTATGTGATAGGCATTTTGGAGGGATCAATTACCCTGTTGGTGGGGTTGGTGGAATTGCGAAGTCCTTATCAAAAGGTCTGGTTGATCAGGGCAGTGAAATACTTTACAGGGCAAATGTGACCAACATCATTCTTGAGCATGGAAAGGCTGTAGGAGTAAGGCTTTCAGATGGAAGGGAGTTCTTTGGAAAAACCATAATCTCAAATGCTACTAGATGGGATACCTTTGGGAAGTTGTTAAAAGGAGAAACCCTTCCAAAAGAAGAAGAAAATTTCCAAAAAGTTTATGTTAAGGCTCCATCTTTTCTTTCCATTCACATGGGTGTTAAAGCCGAGGTTCTACCACCAGATACAGATTGCCACCATTTTGTGCTTGAGGATGACTGGGCAAGATTAGAGGAGCCTTATGGAAGCATATTTCTAAGCATTCCAACTGTTCTTGATTCGTCATTGGCTCCTGAAGGCCATCATATACTTCACATATTTACAACATCTTCCATTGAAGACTGGGAGGGACTCTCGACAAAGGACTATGAGGCCAAGAAGAAGGTTGTGGCTGATGAGATTATAAGCAGATTGGAGAAGAAACTTTTTCCCGGGATCAGATCATCAATTGCTTTCATGGAGGTGGGTTCACCCAAGACGCACAGGCGGTACCTGGCTCGTGATAAGGGTACTTATGGACCAATGCCACGCAGAACTCCTAAAGGTTTATTGGGAATGCCATTCAATACGACGGCTGTAGATGGTCTTTACTGTGTTGGCGATAGCTGCTTTCCAGGACAGGGCGTGATAGCTGTAGCTTTTTCAGGAGTAATGTGTGCTCATCGAGTAGCTGCTGATATTGGCATTGAGAAAAGGTCTCCTGTACTGGATGCTGCTCTCCTTCGGCTTCTTGGCTGGTTAAGGACCTTGGCATGA
Protein:  
MSLGFKNSLFFGQFNTVQLGSSKSRSQKHRILSIEPVRTSVLDGYIVPRNIKGKIDNLGKVKLNKDFVLRSKSVLTVDKEVDVDGNGELGRERSNYDAIVIGSGIGGLVAATQLAVKGAKVLVLEKYVIPGGSSGYYERDGYTFDVGSSVMFGFSDKGNLNLITRALAAVGCEMEVIPDPTTVHFHLPNDLSVQVHREYIDFISELAAKFPHEKDGILKFYGECWKIFNALNSLELKSLEEPIYLFGQFFQKPLECLTLAYYLPQNAGDIARKYMKDPQLLSFIDAECFIVSTVNALQTPMINAAMVLCDRHFGGINYPVGGVGGIAKSLSKGLVDQGSEILYRANVTNIILEHGKAVGVRLSDGREFFGKTIISNATRWDTFGKLLKGETLPKEEENFQKVYVKAPSFLSIHMGVKAEVLPPDTDCHHFVLEDDWARLEEPYGSIFLSIPTVLDSSLAPEGHHILHIFTTSSIEDWEGLSTKDYEAKKKVVADEIISRLEKKLFPGIRSSIAFMEVGSPKTHRRYLARDKGTYGPMPRRTPKGLLGMPFNTTAVDGLYCVGDSCFPGQGVIAVAFSGVMCAHRVAADIGIEKRSPVLDAALLRLLGWLRTLA